BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030B02SP1|AL429163
(806 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig536 719 0.0
3x_Contig863 143 4e-34
>3x_Contig536
Length = 2010
Score = 719 bits (361), Expect = 0.0
Identities = 437/461 (94%), Gaps = 1/461 (0%)
Strand = Plus / Minus
Query: 1 ataccttacagaagaaagtagatcacgtgaaaatgataacatcacgtaccctacagatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 ataccttacagaagaaagtagatcacgtgaaaatgataacatcacgtaccctacagatgg 644
Query: 61 atccagaaagtgtgcgggtaatacctacaagcggggtgaatggaactggattggaccagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 atccagaaagtgtgcgggtaatacctacaagcggggtgaatggaactggattggaccagc 584
Query: 121 taataacgttactagaggacaaatgaagggagctcgcggtacgtcagtggaatcatccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 taataacgttactagaggacaaatgaagggagctcgcggtacgtcagtggaatcatccct 524
Query: 181 aaaggagaccagaaaatctaaagtttcacatgagataactccgggaagtcacgtgatgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 aaaggagaccagaaaatctaaagtttcacatgagataactccgggaagtcacgtgatgca 464
Query: 241 tacagagcatgaatttggcccttatacatcggaagaaatcggaacactacggataaaaag 300
||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 463 tacagagcatgaatttggcccttatacatcggacgacctcggaacactacggataaaaag 404
Query: 301 ctcgttgagccaaaatggacgaatagaactcatgaagagagttagtggctcttcccttgc 360
||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 403 ctcgttgagcccccctggacgaatagaactcatgaagagagtcagtggctcttcccttgc 344
Query: 361 gcgcgcttctggttgaaaacaagtgacttgtagttacgtagatggatcgctttgtaataa 420
||||||||||||||| || |||||||||||||||||||||| |||||||||| |
Sbjct: 343 gcgcgcttctggttg-ccccacgtgacttgtagttacgtagatgaatcgctttgtcctcc 285
Query: 421 cgactcatatttatcagtccaagtcttacttttcatacatt 461
|||||||| ||| || ||| | ||||||||||| |||||||
Sbjct: 284 cgactcatctttctccgtcaacgtcttacttttaatacatt 244
>3x_Contig863
Length = 2811
Score = 143 bits (72), Expect = 4e-34
Identities = 73/74 (98%)
Strand = Plus / Plus
Query: 733 cctagagttaggatattttgttgaaagagactttcagcacttattgatataaatatcatc 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 cctagagttaggatattttgttgaaagagactttcagcacttattgatataaatatcatc 63
Query: 793 atctctttcttytt 806
||||||||||| ||
Sbjct: 64 atctctttcttctt 77
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,188
Number of Sequences: 1807
Number of extensions: 14188
Number of successful extensions: 137
Number of sequences better than 1.0e-20: 2
length of query: 806
length of database: 10,358,551
effective HSP length: 16
effective length of query: 790
effective length of database: 10,329,639
effective search space: 8160414810
effective search space used: 8160414810
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)